Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RC3H1Q5TC82 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC067930.6-201ENST00000623257 4947 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC012066.1-201ENST00000439252 694 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC012513.2-201ENST00000441511 1137 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 PRDX3P2-201ENST00000447051 611 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 RPL7AP53-201ENST00000468834 793 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 RN7SL76P-201ENST00000482435 289 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC073862.3-201ENST00000624597 1648 ntBASIC16.76■□□□□ 0.27
RC3H1Q5TC82 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RC3H1Q5TC82 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 LINC00638-201ENST00000555578 2518 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AC005912.2-201ENST00000619492 2400 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 RNA5SP407-201ENST00000410275 110 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 SERPINA7P1-201ENST00000443077 631 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 PCDHA3-202ENST00000532566 4594 ntBASIC16.75■□□□□ 0.27
RC3H1Q5TC82 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.75■□□□□ 0.27
RC3H1Q5TC82 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms