Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CICP17-201ENST00000418553 2377 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 RPL10-203ENST00000406022 748 ntTSL 3 BASIC12.34□□□□□ -0.43
SUMO3P55854 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 AP003398.1-201ENST00000531124 318 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC12.34□□□□□ -0.43
SUMO3P55854 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.34□□□□□ -0.43
SUMO3P55854 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SUMO3P55854 MIR6842-201ENST00000612539 65 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 AC137723.2-201ENST00000623540 398 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 RBM22P2-201ENST00000393978 1814 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 AL365181.1-201ENST00000564032 1828 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SUMO3P55854 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.34□□□□□ -0.43
SUMO3P55854 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SUMO3P55854 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.34□□□□□ -0.43
SUMO3P55854 PTPRVP-205ENST00000641549 5067 ntBASIC12.34□□□□□ -0.43
SUMO3P55854 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SUMO3P55854 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SUMO3P55854 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SUMO3P55854 AC007336.3-201ENST00000623886 2160 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 AMHR2-204ENST00000550311 1787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 DLX4-206ENST00000611342 1662 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.33□□□□□ -0.44
SUMO3P55854 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 U3.5-201ENST00000363448 216 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 RPSAP31-201ENST00000416648 895 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 HINT2P1-201ENST00000419438 481 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 HNRNPA1P33-201ENST00000421426 561 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 AC069218.1-201ENST00000435269 762 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SUMO3P55854 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
SUMO3P55854 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SUMO3P55854 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 Z97653.2-201ENST00000623057 1418 ntBASIC12.33□□□□□ -0.44
SUMO3P55854 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.33□□□□□ -0.44
SUMO3P55854 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.33□□□□□ -0.44
SUMO3P55854 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SUMO3P55854 CA6-205ENST00000480186 1493 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms