Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ATRXP46100 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC12.31□□□□□ -0.44
ATRXP46100 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC12.31□□□□□ -0.44
ATRXP46100 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.31□□□□□ -0.44
ATRXP46100 MTND6P4-201ENST00000506002 522 ntBASIC12.31□□□□□ -0.44
ATRXP46100 AKR1B1P3-201ENST00000525311 588 ntBASIC12.31□□□□□ -0.44
ATRXP46100 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.31□□□□□ -0.44
ATRXP46100 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 AC097359.2-201ENST00000604992 2389 ntBASIC12.31□□□□□ -0.44
ATRXP46100 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.31□□□□□ -0.44
ATRXP46100 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 ASLP1-201ENST00000428790 637 ntBASIC12.31□□□□□ -0.44
ATRXP46100 OR7E126P-201ENST00000526217 888 ntBASIC12.31□□□□□ -0.44
ATRXP46100 AC106782.3-201ENST00000563429 258 ntBASIC12.31□□□□□ -0.44
ATRXP46100 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 AC026691.1-201ENST00000602502 2017 ntBASIC12.31□□□□□ -0.44
ATRXP46100 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.31□□□□□ -0.44
ATRXP46100 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC12.31□□□□□ -0.44
ATRXP46100 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC12.31□□□□□ -0.44
ATRXP46100 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ATRXP46100 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.3□□□□□ -0.44
ATRXP46100 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 AP000437.1-201ENST00000624057 2085 ntBASIC12.3□□□□□ -0.44
ATRXP46100 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.3□□□□□ -0.44
ATRXP46100 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ATRXP46100 USP8-219ENST00000625664 1568 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.3□□□□□ -0.44
ATRXP46100 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 TIPRL-201ENST00000367830 727 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ATRXP46100 CIDECP-203ENST00000424691 1088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 AC012100.1-201ENST00000470304 282 ntBASIC12.3□□□□□ -0.44
ATRXP46100 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC12.3□□□□□ -0.44
ATRXP46100 SLC25A5P6-201ENST00000515328 886 ntBASIC12.3□□□□□ -0.44
ATRXP46100 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC12.3□□□□□ -0.44
ATRXP46100 AC090095.1-201ENST00000519275 871 ntBASIC12.3□□□□□ -0.44
ATRXP46100 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC12.3□□□□□ -0.44
ATRXP46100 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 AL136115.2-201ENST00000602889 587 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.3□□□□□ -0.44
ATRXP46100 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.3□□□□□ -0.44
ATRXP46100 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
ATRXP46100 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ATRXP46100 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.3□□□□□ -0.44
ATRXP46100 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms