Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SOX11P35716 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
SOX11P35716 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.55□□□□□ -0.24
SOX11P35716 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 PDIA3P2-201ENST00000428073 158 ntBASIC13.55□□□□□ -0.24
SOX11P35716 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.55□□□□□ -0.24
SOX11P35716 AL353637.1-201ENST00000451571 732 ntBASIC13.55□□□□□ -0.24
SOX11P35716 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.55□□□□□ -0.24
SOX11P35716 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.55□□□□□ -0.24
SOX11P35716 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 AC243972.2-201ENST00000541653 991 ntBASIC13.55□□□□□ -0.24
SOX11P35716 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.55□□□□□ -0.24
SOX11P35716 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.55□□□□□ -0.24
SOX11P35716 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.55□□□□□ -0.24
SOX11P35716 AC020922.3-201ENST00000595064 547 ntBASIC13.55□□□□□ -0.24
SOX11P35716 AL136370.1-201ENST00000608166 691 ntBASIC13.55□□□□□ -0.24
SOX11P35716 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.55□□□□□ -0.24
SOX11P35716 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 AC144522.1-201ENST00000625111 1658 ntBASIC13.55□□□□□ -0.24
SOX11P35716 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.55□□□□□ -0.24
SOX11P35716 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.55□□□□□ -0.24
SOX11P35716 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SOX11P35716 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 AL121578.1-201ENST00000428051 892 ntBASIC13.54□□□□□ -0.24
SOX11P35716 MAGEA5-201ENST00000446757 942 ntBASIC13.54□□□□□ -0.24
SOX11P35716 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC13.54□□□□□ -0.24
SOX11P35716 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC13.54□□□□□ -0.24
SOX11P35716 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC13.54□□□□□ -0.24
SOX11P35716 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 AL133499.1-201ENST00000596207 608 ntBASIC13.54□□□□□ -0.24
SOX11P35716 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 AC133540.1-201ENST00000620845 1019 ntBASIC13.54□□□□□ -0.24
SOX11P35716 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.54□□□□□ -0.24
SOX11P35716 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SOX11P35716 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SOX11P35716 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SOX11P35716 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SOX11P35716 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SOX11P35716 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms