Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC103810.3-201ENST00000583567 96 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 AL133467.4-201ENST00000602953 725 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SNORA50.1-201ENST00000628590 135 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 KRT8P43-201ENST00000406052 1458 ntBASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
HLA-DRB4X5D2U9 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 KRT8P31-201ENST00000504812 1408 ntBASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
HLA-DRB4X5D2U9 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AL358781.1-202ENST00000321081 1360 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AC110048.1-201ENST00000604293 2157 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 MARK2P16-201ENST00000605714 1723 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LINC00265-2P-201ENST00000413372 782 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CENPX-208ENST00000584347 799 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AL109837.1-201ENST00000603272 613 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 MIR6787-201ENST00000616675 61 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 AP001505.2-201ENST00000616815 443 ntBASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms