Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 TPM3P8-201ENST00000330554 643 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 BTBD6P1-201ENST00000412176 1267 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 DEFT1P-201ENST00000453425 496 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 KRT8P13-201ENST00000463294 1010 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC018635.1-201ENST00000468292 1030 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 FAM86HP-204ENST00000513466 959 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC078819.1-201ENST00000547454 765 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 AC012085.1-201ENST00000548270 765 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC243960.2-201ENST00000600996 747 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 AC034229.4-201ENST00000607861 441 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.78□□□□□ -0.36
HPS1Q92902 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HPS1Q92902 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC097655.1-201ENST00000635075 318 ntBASIC12.78□□□□□ -0.36
HPS1Q92902 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HPS1Q92902 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HPS1Q92902 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.78□□□□□ -0.36
HPS1Q92902 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HPS1Q92902 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
HPS1Q92902 AC005696.4-201ENST00000614400 3147 ntBASIC12.77□□□□□ -0.36
HPS1Q92902 BX537318.2-201ENST00000624893 4162 ntBASIC12.77□□□□□ -0.36
HPS1Q92902 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HPS1Q92902 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.77□□□□□ -0.36
HPS1Q92902 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.77□□□□□ -0.36
HPS1Q92902 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.77□□□□□ -0.36
HPS1Q92902 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
HPS1Q92902 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HPS1Q92902 HERC2P10-201ENST00000570209 2393 ntBASIC12.77□□□□□ -0.36
HPS1Q92902 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.77□□□□□ -0.36
HPS1Q92902 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.77□□□□□ -0.36
HPS1Q92902 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HPS1Q92902 AL391647.1-201ENST00000395664 511 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.77□□□□□ -0.37
HPS1Q92902 MIR1247-201ENST00000408206 136 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 AC006033.1-201ENST00000440505 426 ntBASIC12.77□□□□□ -0.37
HPS1Q92902 AC245100.3-201ENST00000441281 285 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms