Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AC117503.4-201ENST00000623229 1418 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 Z69890.1-201ENST00000382990 339 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 DKKL1P1-201ENST00000400550 698 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 RN7SL375P-201ENST00000492442 298 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 MIR3147-201ENST00000577811 66 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AL009176.1-201ENST00000607876 650 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 MIR7845-201ENST00000618396 99 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LYSMD3Q7Z3D4 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 HIST2H2BA-201ENST00000412169 381 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 RPL18AP3-201ENST00000462885 528 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AC008267.1-201ENST00000474858 1069 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AP000911.2-201ENST00000534330 502 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AC005041.3-201ENST00000606287 649 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 AC107464.3-201ENST00000609172 737 ntBASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.81□□□□□ -0.2
LYSMD3Q7Z3D4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms