Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
VTNP04004 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 CD37-203ENST00000426897 1204 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 RPL3P5-201ENST00000441645 1232 ntBASIC14.89□□□□□ -0.03
VTNP04004 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC14.89□□□□□ -0.03
VTNP04004 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 NDUFB2P1-201ENST00000506966 295 ntBASIC14.89□□□□□ -0.03
VTNP04004 BCL2L12P1-201ENST00000508390 733 ntBASIC14.89□□□□□ -0.03
VTNP04004 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 AP000920.1-201ENST00000531824 344 ntBASIC14.89□□□□□ -0.03
VTNP04004 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC14.89□□□□□ -0.03
VTNP04004 NAV1-210ENST00000593583 726 ntBASIC14.89□□□□□ -0.03
VTNP04004 Z82244.1-201ENST00000631502 840 ntBASIC14.89□□□□□ -0.03
VTNP04004 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 AC131212.3-201ENST00000624087 4219 ntBASIC14.89□□□□□ -0.03
VTNP04004 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.89□□□□□ -0.03
VTNP04004 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
VTNP04004 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 NCLP1-201ENST00000445357 1963 ntBASIC14.89□□□□□ -0.03
VTNP04004 AGAP12P-201ENST00000585227 2359 ntBASIC14.89□□□□□ -0.03
VTNP04004 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
VTNP04004 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 MEX3B-202ENST00000558133 4333 ntBASIC14.88□□□□□ -0.03
VTNP04004 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
VTNP04004 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
VTNP04004 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.88□□□□□ -0.03
VTNP04004 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 GBAP1-208ENST00000566701 1546 ntBASIC14.88□□□□□ -0.03
VTNP04004 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 ZNF436-AS1-201ENST00000335648 2547 ntBASIC14.88□□□□□ -0.03
VTNP04004 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VTNP04004 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
VTNP04004 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.88□□□□□ -0.03
VTNP04004 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.88□□□□□ -0.03
VTNP04004 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.88□□□□□ -0.03
VTNP04004 MIR5091-201ENST00000578707 93 ntBASIC14.88□□□□□ -0.03
VTNP04004 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.88□□□□□ -0.03
VTNP04004 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.88□□□□□ -0.03
VTNP04004 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 BX322534.1-201ENST00000635574 241 ntBASIC14.88□□□□□ -0.03
VTNP04004 AC215524.1-201ENST00000635696 241 ntBASIC14.88□□□□□ -0.03
VTNP04004 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.88□□□□□ -0.03
VTNP04004 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 AC007336.3-201ENST00000623886 2160 ntBASIC14.88□□□□□ -0.03
VTNP04004 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
VTNP04004 AP000437.1-201ENST00000624057 2085 ntBASIC14.88□□□□□ -0.03
VTNP04004 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
VTNP04004 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
VTNP04004 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VTNP04004 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 AL358781.1-202ENST00000321081 1360 ntBASIC14.87□□□□□ -0.03
VTNP04004 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.87□□□□□ -0.03
VTNP04004 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VTNP04004 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms