Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 HLA-K-203ENST00000430151 1046 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 Z93015.1-201ENST00000451718 390 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.8□□□□□ -0.36
HPS1Q92902 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.8□□□□□ -0.36
HPS1Q92902 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HPS1Q92902 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC12.8□□□□□ -0.36
HPS1Q92902 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 AC009542.2-202ENST00000619004 1067 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.8□□□□□ -0.36
HPS1Q92902 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.8□□□□□ -0.36
HPS1Q92902 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HPS1Q92902 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HPS1Q92902 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 AL138709.1-201ENST00000614840 1693 ntBASIC12.8□□□□□ -0.36
HPS1Q92902 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HPS1Q92902 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 FAM197Y7-201ENST00000432892 766 ntBASIC12.79□□□□□ -0.36
HPS1Q92902 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.79□□□□□ -0.36
HPS1Q92902 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.79□□□□□ -0.36
HPS1Q92902 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.79□□□□□ -0.36
HPS1Q92902 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.79□□□□□ -0.36
HPS1Q92902 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 AC244093.1-201ENST00000610837 814 ntBASIC12.79□□□□□ -0.36
HPS1Q92902 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC12.79□□□□□ -0.36
HPS1Q92902 GPR182-203ENST00000622922 591 ntBASIC12.79□□□□□ -0.36
HPS1Q92902 AC006453.4-201ENST00000636949 1252 ntBASIC12.79□□□□□ -0.36
HPS1Q92902 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
HPS1Q92902 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HPS1Q92902 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.79□□□□□ -0.36
HPS1Q92902 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms