Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.29□□□□□ -0.28
LYSMD4Q5XG99 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AL031587.5-201ENST00000624344 1849 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 RBMX2P5-201ENST00000424312 969 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 IGKV1OR-2-201ENST00000457995 350 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 RN7SL846P-201ENST00000467429 292 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC087072.1-201ENST00000603727 421 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AL390755.1-201ENST00000623716 2027 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 AC015813.5-201ENST00000624641 1514 ntBASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.28□□□□□ -0.28
LYSMD4Q5XG99 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 AL157996.1-201ENST00000624684 2299 ntBASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LYSMD4Q5XG99 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 RBMXP1-201ENST00000408004 1191 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 DUX4L31-201ENST00000446466 1136 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 OR52V1P-201ENST00000515557 898 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 ABCD1P3-201ENST00000562927 605 ntBASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC13.27□□□□□ -0.29
LYSMD4Q5XG99 RPS5-205ENST00000598495 800 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms