Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC253536.5-201ENST00000506097 347 ntBASIC16.81■□□□□ 0.28
RC3H1Q5TC82 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AC073592.10-201ENST00000624789 597 ntBASIC16.81■□□□□ 0.28
RC3H1Q5TC82 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 USP8-219ENST00000625664 1568 ntTSL 5 BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RC3H1Q5TC82 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 PXK-210ENST00000479241 2817 ntTSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 AL358781.1-202ENST00000321081 1360 ntBASIC16.8■□□□□ 0.28
RC3H1Q5TC82 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 HLA-DQB3-203ENST00000425319 356 ntBASIC16.8■□□□□ 0.28
RC3H1Q5TC82 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MED11-203ENST00000575284 652 ntTSL 3 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SNORD55-201ENST00000581525 80 ntBASIC16.8■□□□□ 0.28
RC3H1Q5TC82 METTL23-211ENST00000589977 617 ntTSL 3 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 AC026304.1-201ENST00000597953 561 ntBASIC16.8■□□□□ 0.28
RC3H1Q5TC82 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC16.8■□□□□ 0.28
RC3H1Q5TC82 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 DERL1-204ENST00000519018 575 ntTSL 4 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 RPS9-213ENST00000626547 476 ntTSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RC3H1Q5TC82 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms