Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN1P35523 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLCN1P35523 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCN1P35523 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN1P35523 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCN1P35523 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.67■□□□□ 0.1
CLCN1P35523 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 RN7SL440P-201ENST00000577855 343 ntBASIC15.67■□□□□ 0.1
CLCN1P35523 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.67■□□□□ 0.1
CLCN1P35523 AC104506.1-201ENST00000609247 429 ntBASIC15.67■□□□□ 0.1
CLCN1P35523 AC103798.2-201ENST00000624292 632 ntBASIC15.67■□□□□ 0.1
CLCN1P35523 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CLCN1P35523 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCN1P35523 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CLCN1P35523 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 SNORA50C-201ENST00000408535 133 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 CTBP2P5-201ENST00000454986 1264 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.66■□□□□ 0.1
CLCN1P35523 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.66■□□□□ 0.1
CLCN1P35523 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 SNX29P1-201ENST00000548357 1007 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 SNORA50.1-201ENST00000628590 135 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.66■□□□□ 0.1
CLCN1P35523 LSINCT5-201ENST00000626215 2647 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 PCDHGB8P-202ENST00000507007 2873 ntBASIC15.66■□□□□ 0.1
CLCN1P35523 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.66■□□□□ 0.1
CLCN1P35523 KCNH7-201ENST00000328032 2434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLCN1P35523 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC15.65■□□□□ 0.1
CLCN1P35523 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLCN1P35523 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms