Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 POM121L4P-202ENST00000427789 1891 ntBASIC11.55□□□□□ -0.56
CD74P04233 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CD74P04233 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
CD74P04233 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CD74P04233 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 CICP2-201ENST00000420675 2328 ntBASIC11.54□□□□□ -0.56
CD74P04233 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 AL357140.3-201ENST00000639753 1983 ntBASIC11.54□□□□□ -0.56
CD74P04233 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CD74P04233 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 BRD7P5-201ENST00000299197 1822 ntBASIC11.54□□□□□ -0.56
CD74P04233 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 BCRP2-202ENST00000447763 634 ntBASIC11.54□□□□□ -0.56
CD74P04233 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 AC106794.1-201ENST00000506935 792 ntBASIC11.54□□□□□ -0.56
CD74P04233 BCRP6-201ENST00000510112 632 ntBASIC11.54□□□□□ -0.56
CD74P04233 BCRP7-201ENST00000511549 544 ntBASIC11.54□□□□□ -0.56
CD74P04233 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.54□□□□□ -0.56
CD74P04233 SLC25A47P1-201ENST00000531577 414 ntBASIC11.54□□□□□ -0.56
CD74P04233 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.54□□□□□ -0.56
CD74P04233 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.54□□□□□ -0.56
CD74P04233 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CD74P04233 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 AHCYP2-201ENST00000430630 1300 ntBASIC11.54□□□□□ -0.56
CD74P04233 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC11.54□□□□□ -0.56
CD74P04233 REXO1L1P-201ENST00000379010 6598 ntBASIC11.54□□□□□ -0.56
CD74P04233 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC11.54□□□□□ -0.56
CD74P04233 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CD74P04233 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
CD74P04233 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC11.53□□□□□ -0.56
CD74P04233 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CD74P04233 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CD74P04233 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms