Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHKBP1Q8TBC3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
SHKBP1Q8TBC3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 NRADDP-202ENST00000641269 1585 ntBASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 CR383656.2-201ENST00000548656 2254 ntBASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM86KP-201ENST00000509817 987 ntBASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AL139339.2-201ENST00000608063 657 ntBASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHKBP1Q8TBC3 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC073548.1-201ENST00000624088 1882 ntBASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 RN7SL147P-201ENST00000487345 298 ntBASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC083801.1-201ENST00000491689 358 ntBASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 ESR1-214ENST00000638569 132 ntTSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHKBP1Q8TBC3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms