Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 MARK2P9-201ENST00000430958 1727 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 AC074138.1-201ENST00000611182 1303 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CLDN20P56880 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CLDN20P56880 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CLDN20P56880 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 HINT2P1-201ENST00000419438 481 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN20P56880 CHCHD2P9-201ENST00000461726 456 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 ORAOV1P1-201ENST00000503108 395 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
CLDN20P56880 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN20P56880 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN20P56880 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.65□□□□□ -0.38
CLDN20P56880 SIGLEC22P-201ENST00000599104 714 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.65□□□□□ -0.38
CLDN20P56880 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CLDN20P56880 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.65□□□□□ -0.38
CLDN20P56880 AL805961.1-201ENST00000642026 753 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.65□□□□□ -0.38
CLDN20P56880 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 MEX3B-202ENST00000558133 4333 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CLDN20P56880 RCC2P1-201ENST00000452257 1476 ntBASIC12.65□□□□□ -0.38
CLDN20P56880 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.65□□□□□ -0.39
CLDN20P56880 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLDN20P56880 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CLDN20P56880 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 AC110048.1-201ENST00000604293 2157 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CLDN20P56880 AC006480.2-201ENST00000609770 1337 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 TRIM80P-201ENST00000455685 2848 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.64□□□□□ -0.39
CLDN20P56880 AC092506.1-202ENST00000401022 528 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 PPP1R2P4-201ENST00000424051 595 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 AC098934.1-203ENST00000442868 1262 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 NOC2LP1-201ENST00000450578 752 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.64□□□□□ -0.39
CLDN20P56880 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CLDN20P56880 AC138701.2-201ENST00000553634 226 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.64□□□□□ -0.39
CLDN20P56880 AC007881.3-201ENST00000608897 607 ntBASIC12.64□□□□□ -0.39
CLDN20P56880 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLDN20P56880 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CLDN20P56880 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CLDN20P56880 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CLDN20P56880 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CLDN20P56880 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms