Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 KRT18P33-201ENST00000398525 1043 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC14.33□□□□□ -0.12
MTHFRP42898 RN7SL578P-201ENST00000477781 283 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.33□□□□□ -0.12
MTHFRP42898 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.33□□□□□ -0.12
MTHFRP42898 AC010202.1-201ENST00000551181 405 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.33□□□□□ -0.12
MTHFRP42898 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 CR392039.1-201ENST00000623217 204 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.33□□□□□ -0.12
MTHFRP42898 AC011474.4-201ENST00000623523 2076 ntBASIC14.33□□□□□ -0.12
MTHFRP42898 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MTHFRP42898 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MTHFRP42898 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.33□□□□□ -0.12
MTHFRP42898 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.32□□□□□ -0.12
MTHFRP42898 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 AC107918.4-201ENST00000641966 3141 ntBASIC14.32□□□□□ -0.12
MTHFRP42898 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MTHFRP42898 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.32□□□□□ -0.12
MTHFRP42898 AC098657.1-201ENST00000416270 1135 ntBASIC14.32□□□□□ -0.12
MTHFRP42898 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.32□□□□□ -0.12
MTHFRP42898 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.32□□□□□ -0.12
MTHFRP42898 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.32□□□□□ -0.12
MTHFRP42898 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC14.32□□□□□ -0.12
MTHFRP42898 AC090510.3-201ENST00000615831 821 ntBASIC14.32□□□□□ -0.12
MTHFRP42898 AC137723.2-201ENST00000623540 398 ntBASIC14.32□□□□□ -0.12
MTHFRP42898 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
MTHFRP42898 MST1P2-201ENST00000457982 2291 ntBASIC14.32□□□□□ -0.12
MTHFRP42898 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.32□□□□□ -0.12
MTHFRP42898 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MTHFRP42898 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
MTHFRP42898 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MTHFRP42898 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.31□□□□□ -0.12
MTHFRP42898 MIR632-201ENST00000385193 94 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 AL121949.3-201ENST00000406684 385 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.31□□□□□ -0.12
MTHFRP42898 AC007279.1-201ENST00000448547 837 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.31□□□□□ -0.12
MTHFRP42898 RN7SL684P-201ENST00000465665 294 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.31□□□□□ -0.12
MTHFRP42898 AC099328.1-201ENST00000498809 1030 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.31□□□□□ -0.12
MTHFRP42898 AP000920.1-201ENST00000531824 344 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.31□□□□□ -0.12
MTHFRP42898 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC14.31□□□□□ -0.12
MTHFRP42898 PRR20FP-201ENST00000603320 180 ntBASIC14.31□□□□□ -0.12
MTHFRP42898 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.31□□□□□ -0.12
MTHFRP42898 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 DDC-204ENST00000426377 1700 ntTSL 3 BASIC14.31□□□□□ -0.12
MTHFRP42898 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MTHFRP42898 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms