Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PPP1R26P2-201ENST00000611403 3595 ntBASIC14.94□□□□□ -0.02
VTNP04004 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.94□□□□□ -0.02
VTNP04004 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 ZNF493-208ENST00000599461 1769 ntBASIC14.93□□□□□ -0.02
VTNP04004 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VTNP04004 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VTNP04004 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.93□□□□□ -0.02
VTNP04004 DDX39AP1-201ENST00000445147 1181 ntBASIC14.93□□□□□ -0.02
VTNP04004 AC092896.1-201ENST00000465850 380 ntBASIC14.93□□□□□ -0.02
VTNP04004 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.93□□□□□ -0.02
VTNP04004 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.93□□□□□ -0.02
VTNP04004 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
VTNP04004 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
VTNP04004 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VTNP04004 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VTNP04004 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.92□□□□□ -0.02
VTNP04004 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
VTNP04004 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 OR7E155P-201ENST00000412208 1014 ntBASIC14.92□□□□□ -0.02
VTNP04004 AC092570.1-201ENST00000414446 469 ntBASIC14.92□□□□□ -0.02
VTNP04004 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 AL136084.1-201ENST00000449172 318 ntBASIC14.92□□□□□ -0.02
VTNP04004 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
VTNP04004 FAM86KP-201ENST00000509817 987 ntBASIC14.92□□□□□ -0.02
VTNP04004 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC14.92□□□□□ -0.02
VTNP04004 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.92□□□□□ -0.02
VTNP04004 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.92□□□□□ -0.02
VTNP04004 MEP1AP1-201ENST00000636082 1097 ntBASIC14.92□□□□□ -0.02
VTNP04004 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC14.92□□□□□ -0.02
VTNP04004 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
VTNP04004 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VTNP04004 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 BEND3P1-201ENST00000421591 1944 ntBASIC14.92□□□□□ -0.02
VTNP04004 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.92□□□□□ -0.02
VTNP04004 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VTNP04004 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VTNP04004 KRT8P38-201ENST00000441370 1430 ntBASIC14.92□□□□□ -0.02
VTNP04004 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VTNP04004 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.91□□□□□ -0.02
VTNP04004 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms