Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOC1P02654 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 MSNP1-201ENST00000511640 1732 ntBASIC12.26□□□□□ -0.45
APOC1P02654 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 BRD7P5-201ENST00000299197 1822 ntBASIC12.26□□□□□ -0.45
APOC1P02654 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.26□□□□□ -0.45
APOC1P02654 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.26□□□□□ -0.45
APOC1P02654 RCC2P8-201ENST00000502779 1035 ntBASIC12.26□□□□□ -0.45
APOC1P02654 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 AL356740.1-201ENST00000602192 1297 ntBASIC12.26□□□□□ -0.45
APOC1P02654 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.26□□□□□ -0.45
APOC1P02654 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.26□□□□□ -0.45
APOC1P02654 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
APOC1P02654 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
APOC1P02654 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC1P02654 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.25□□□□□ -0.45
APOC1P02654 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.25□□□□□ -0.45
APOC1P02654 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.25□□□□□ -0.45
APOC1P02654 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 RN7SKP214-201ENST00000364208 315 ntBASIC12.25□□□□□ -0.45
APOC1P02654 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOC1P02654 AL008707.1-201ENST00000422498 534 ntBASIC12.25□□□□□ -0.45
APOC1P02654 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.25□□□□□ -0.45
APOC1P02654 AC125604.1-201ENST00000496255 707 ntBASIC12.25□□□□□ -0.45
APOC1P02654 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.25□□□□□ -0.45
APOC1P02654 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 AC010536.1-201ENST00000538868 2611 ntBASIC12.25□□□□□ -0.45
APOC1P02654 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOC1P02654 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOC1P02654 AF013593.1-201ENST00000458074 1487 ntBASIC12.25□□□□□ -0.45
APOC1P02654 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 AL355102.3-201ENST00000554299 1678 ntBASIC12.25□□□□□ -0.45
APOC1P02654 AC093462.1-201ENST00000621167 1683 ntBASIC12.25□□□□□ -0.45
APOC1P02654 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 AC092123.2-201ENST00000611189 5421 ntBASIC12.25□□□□□ -0.45
APOC1P02654 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC1P02654 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC1P02654 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOC1P02654 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms