Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 AC084781.1-201ENST00000613737 656 ntBASIC12.32□□□□□ -0.44
CNOT4O95628 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.32□□□□□ -0.44
CNOT4O95628 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CNOT4O95628 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.32□□□□□ -0.44
CNOT4O95628 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CNOT4O95628 AC019109.1-201ENST00000401725 1874 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CNOT4O95628 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CNOT4O95628 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 ODCP-201ENST00000459650 1639 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 MIR1227-201ENST00000408484 88 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 AC092573.1-201ENST00000433054 884 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.31□□□□□ -0.44
CNOT4O95628 AC007279.1-201ENST00000448547 837 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CNOT4O95628 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.31□□□□□ -0.44
CNOT4O95628 RN7SL470P-201ENST00000583069 259 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.31□□□□□ -0.44
CNOT4O95628 AC012073.1-201ENST00000606114 1108 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 AC025262.2-201ENST00000623975 1056 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 CICP16-201ENST00000502609 2813 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 PDXDC2P-206ENST00000534700 1315 ntBASIC12.31□□□□□ -0.44
CNOT4O95628 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CNOT4O95628 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.31□□□□□ -0.44
CNOT4O95628 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CNOT4O95628 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.3□□□□□ -0.44
CNOT4O95628 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.3□□□□□ -0.44
CNOT4O95628 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.3□□□□□ -0.44
CNOT4O95628 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.3□□□□□ -0.44
CNOT4O95628 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CNOT4O95628 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CNOT4O95628 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.3□□□□□ -0.44
CNOT4O95628 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms