Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 CICP1-201ENST00000416803 2410 ntBASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC10.44□□□□□ -0.74
HLA-DRB4X5D2U9 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 BX324167.2-201ENST00000623717 3316 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ACTG1P2-201ENST00000415776 1125 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ACTG1P11-201ENST00000425411 1125 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SPTLC1P5-201ENST00000450718 252 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 HIST2H2BC-201ENST00000498492 580 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SLC25A15P3-201ENST00000505530 290 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AL161670.2-201ENST00000557650 1227 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC244093.1-201ENST00000610837 814 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MEG3_2.1-201ENST00000611456 105 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MIR6769A-201ENST00000617340 73 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MIR6799-201ENST00000620297 69 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SALL4P6-201ENST00000429385 1691 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AC008620.2-201ENST00000510294 1569 ntBASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
HLA-DRB4X5D2U9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC10.42□□□□□ -0.74
HLA-DRB4X5D2U9 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms