Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC023794.5-201ENST00000564380 2157 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 SNORA57-201ENST00000383870 149 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 RPL29P2-201ENST00000488409 460 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC147876.1-201ENST00000504408 322 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AL356740.1-201ENST00000602192 1297 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AL513497.1-201ENST00000624273 2083 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 Z82170.1-201ENST00000625081 3192 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 AC111170.3-201ENST00000624282 2464 ntBASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
DNMT3BQ9UBC3 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 KRT18P33-201ENST00000398525 1043 ntBASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 SDCBP2P1-201ENST00000416115 614 ntBASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 SNORA47-201ENST00000458862 138 ntBASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 RN7SL524P-201ENST00000581152 300 ntBASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 AC016582.2-202ENST00000587765 1094 ntBASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DNMT3BQ9UBC3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms