Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AL035633.1-201ENST00000406139 838 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 RPL28-204ENST00000431533 590 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FAM197Y7-201ENST00000432892 766 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 KRT17P7-201ENST00000451704 1104 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC144522.1-201ENST00000625111 1658 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 AC091181.1-201ENST00000623762 2098 ntBASIC11.2□□□□□ -0.62
RAB40CQ96S21 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
RAB40CQ96S21 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.2□□□□□ -0.62
RAB40CQ96S21 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 USB1-207ENST00000563149 1751 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.19□□□□□ -0.62
RAB40CQ96S21 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
RAB40CQ96S21 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms