Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 IGHV3-37-201ENST00000518544 340 ntBASIC14.97□□□□□ -0.01
NCKAP1LP55160 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AC013553.1-201ENST00000560906 267 ntBASIC14.97□□□□□ -0.01
NCKAP1LP55160 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 POM121L4P-202ENST00000427789 1891 ntBASIC14.97□□□□□ -0.01
NCKAP1LP55160 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC14.97□□□□□ -0.01
NCKAP1LP55160 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NCKAP1LP55160 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 CICP9-201ENST00000444451 1913 ntBASIC14.96□□□□□ -0.01
NCKAP1LP55160 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 SNORD23-201ENST00000408876 110 ntBASIC14.96□□□□□ -0.01
NCKAP1LP55160 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 AL357079.1-203ENST00000412378 494 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 KRT18P37-201ENST00000520711 1282 ntBASIC14.96□□□□□ -0.01
NCKAP1LP55160 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.96□□□□□ -0.01
NCKAP1LP55160 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NCKAP1LP55160 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 HNRNPLP1-201ENST00000421896 1501 ntBASIC14.96□□□□□ -0.02
NCKAP1LP55160 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 CICP17-201ENST00000418553 2377 ntBASIC14.96□□□□□ -0.02
NCKAP1LP55160 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 AC126335.2-201ENST00000623362 4637 ntBASIC14.96□□□□□ -0.02
NCKAP1LP55160 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NCKAP1LP55160 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NCKAP1LP55160 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 U3.5-201ENST00000363448 216 ntBASIC14.95□□□□□ -0.02
NCKAP1LP55160 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NCKAP1LP55160 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC14.95□□□□□ -0.02
NCKAP1LP55160 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms