Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP4P49662 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 AC074138.1-201ENST00000611182 1303 ntBASIC14.96□□□□□ -0.01
CASP4P49662 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CASP4P49662 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 AC026316.1-201ENST00000398900 414 ntBASIC14.96□□□□□ -0.01
CASP4P49662 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP4P49662 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP4P49662 RN7SL767P-201ENST00000493013 295 ntBASIC14.96□□□□□ -0.01
CASP4P49662 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP4P49662 AC007952.4-201ENST00000573866 637 ntBASIC14.96□□□□□ -0.01
CASP4P49662 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP4P49662 AC132812.1-201ENST00000583145 892 ntBASIC14.96□□□□□ -0.01
CASP4P49662 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC14.96□□□□□ -0.01
CASP4P49662 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
CASP4P49662 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.96□□□□□ -0.01
CASP4P49662 AC106872.11-201ENST00000605838 421 ntBASIC14.96□□□□□ -0.01
CASP4P49662 AL359091.4-201ENST00000610052 409 ntBASIC14.96□□□□□ -0.01
CASP4P49662 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.96□□□□□ -0.01
CASP4P49662 AC242376.2-201ENST00000619355 883 ntBASIC14.96□□□□□ -0.01
CASP4P49662 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CASP4P49662 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CASP4P49662 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP4P49662 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP4P49662 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
CASP4P49662 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CASP4P49662 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CASP4P49662 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 RNVU1-8-201ENST00000364272 125 ntBASIC14.95□□□□□ -0.02
CASP4P49662 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.95□□□□□ -0.02
CASP4P49662 AC025186.1-201ENST00000478174 870 ntBASIC14.95□□□□□ -0.02
CASP4P49662 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CASP4P49662 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.95□□□□□ -0.02
CASP4P49662 AC005041.3-201ENST00000606287 649 ntBASIC14.95□□□□□ -0.02
CASP4P49662 AC007250.1-201ENST00000608934 338 ntBASIC14.95□□□□□ -0.02
CASP4P49662 YRDCP1-201ENST00000621419 643 ntBASIC14.95□□□□□ -0.02
CASP4P49662 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 IL9RP3-201ENST00000442856 1674 ntBASIC14.95□□□□□ -0.02
CASP4P49662 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.95□□□□□ -0.02
CASP4P49662 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CASP4P49662 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 AC126335.2-201ENST00000623362 4637 ntBASIC14.95□□□□□ -0.02
CASP4P49662 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CASP4P49662 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CASP4P49662 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms