Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPSAP5-201ENST00000485258 884 ntBASIC15.15■□□□□ 0.02
TM4SF4P48230 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM4SF4P48230 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC15.15■□□□□ 0.02
TM4SF4P48230 AC013356.4-201ENST00000558421 482 ntTSL 2 BASIC15.15■□□□□ 0.02
TM4SF4P48230 AL512631.1-201ENST00000604086 840 ntBASIC15.15■□□□□ 0.02
TM4SF4P48230 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC15.15■□□□□ 0.02
TM4SF4P48230 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM4SF4P48230 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM4SF4P48230 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC15.15■□□□□ 0.02
TM4SF4P48230 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TM4SF4P48230 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TM4SF4P48230 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TM4SF4P48230 CICP16-201ENST00000502609 2813 ntBASIC15.15■□□□□ 0.02
TM4SF4P48230 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC023830.3-201ENST00000612995 1455 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC091807.1-201ENST00000418838 1544 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 TCAM1P-207ENST00000485295 1537 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 RNA5SP248-201ENST00000365602 127 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 IGLV3-21-201ENST00000390308 602 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC017081.1-201ENST00000420063 823 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 AL929472.4-201ENST00000447422 691 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 CHIAP2-202ENST00000449687 669 ntTSL 3 BASIC15.14■□□□□ 0.01
TM4SF4P48230 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC023157.1-201ENST00000453713 402 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 AC106748.1-201ENST00000454801 384 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 MTND6P9-201ENST00000458075 519 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC15.14■□□□□ 0.01
TM4SF4P48230 RN7SKP195-201ENST00000516587 303 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 HNRNPA1P7-201ENST00000521273 963 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 MIR4763-201ENST00000581461 92 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 MIR1587-201ENST00000583319 53 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 AC005336.1-201ENST00000585431 1243 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 AC022966.2-201ENST00000587434 367 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC132872.4-202ENST00000622924 2756 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 Z97653.2-201ENST00000623057 1418 ntBASIC15.14■□□□□ 0.01
TM4SF4P48230 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 ANXA13-201ENST00000262219 1588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC15.14■□□□□ 0.01
TM4SF4P48230 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TM4SF4P48230 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
TM4SF4P48230 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 POTEC-201ENST00000358970 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TM4SF4P48230 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 Z98259.1-201ENST00000564261 1697 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.13■□□□□ 0.01
TM4SF4P48230 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TM4SF4P48230 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TM4SF4P48230 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.13■□□□□ 0.01
TM4SF4P48230 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 ARF1P2-201ENST00000392493 538 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TM4SF4P48230 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC15.13■□□□□ 0.01
TM4SF4P48230 RPL19P20-201ENST00000415648 591 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 PIN1P1-202ENST00000439639 301 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 AC016304.1-201ENST00000476363 413 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC15.13■□□□□ 0.01
TM4SF4P48230 SPTY2D1-AS1-202ENST00000511927 573 ntAPPRIS ALT2 TSL 4 BASIC15.13■□□□□ 0.01
TM4SF4P48230 DNM1P17-201ENST00000512082 426 ntBASIC15.13■□□□□ 0.01
TM4SF4P48230 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms