Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.77□□□□□ -0.05
SSR1P43307 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.77□□□□□ -0.05
SSR1P43307 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR1P43307 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SSR1P43307 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SSR1P43307 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSR1P43307 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSR1P43307 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 TUBB1P2-201ENST00000422712 1306 ntBASIC14.76□□□□□ -0.05
SSR1P43307 TUBB1P1-201ENST00000503144 1300 ntBASIC14.76□□□□□ -0.05
SSR1P43307 LSINCT5-201ENST00000626215 2647 ntBASIC14.76□□□□□ -0.05
SSR1P43307 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 RNA5SP359-201ENST00000364838 113 ntBASIC14.76□□□□□ -0.05
SSR1P43307 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.76□□□□□ -0.05
SSR1P43307 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 RPS9P1-201ENST00000419943 583 ntBASIC14.76□□□□□ -0.05
SSR1P43307 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.76□□□□□ -0.05
SSR1P43307 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 AL359845.1-201ENST00000458202 1648 ntBASIC14.76□□□□□ -0.05
SSR1P43307 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSR1P43307 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 KRT8P21-201ENST00000430398 1491 ntBASIC14.76□□□□□ -0.05
SSR1P43307 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.76□□□□□ -0.05
SSR1P43307 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.76□□□□□ -0.05
SSR1P43307 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 HERC2P10-201ENST00000570209 2393 ntBASIC14.75□□□□□ -0.05
SSR1P43307 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 AC092123.2-201ENST00000611189 5421 ntBASIC14.75□□□□□ -0.05
SSR1P43307 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SSR1P43307 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 ALG1L13P-202ENST00000519320 584 ntBASIC14.75□□□□□ -0.05
SSR1P43307 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.75□□□□□ -0.05
SSR1P43307 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 CSH2-206ENST00000560142 749 ntTSL 5 BASIC14.75□□□□□ -0.05
SSR1P43307 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.75□□□□□ -0.05
SSR1P43307 AL022334.2-201ENST00000610000 484 ntBASIC14.75□□□□□ -0.05
SSR1P43307 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 432.4 ms