Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.39□□□□□ -0.11
SLC1A1P43005 AC239800.4-201ENST00000603712 296 ntBASIC14.39□□□□□ -0.11
SLC1A1P43005 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.39□□□□□ -0.11
SLC1A1P43005 AC091544.8-201ENST00000619490 361 ntBASIC14.39□□□□□ -0.11
SLC1A1P43005 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
SLC1A1P43005 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SLC1A1P43005 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SLC1A1P43005 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 RBM22P2-201ENST00000393978 1814 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLC1A1P43005 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC1A1P43005 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC1A1P43005 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.38□□□□□ -0.11
SLC1A1P43005 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SLC1A1P43005 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 DKKL1P1-201ENST00000400550 698 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 AC026320.2-201ENST00000434379 478 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 AC006335.1-201ENST00000445200 547 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 DUTP3-201ENST00000450025 415 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SLC1A1P43005 AC008723.1-201ENST00000506922 207 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.38□□□□□ -0.11
SLC1A1P43005 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.38□□□□□ -0.11
SLC1A1P43005 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SLC1A1P43005 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC14.38□□□□□ -0.11
SLC1A1P43005 PDXDC2P-206ENST00000534700 1315 ntBASIC14.38□□□□□ -0.11
SLC1A1P43005 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SLC1A1P43005 EGLN3-205ENST00000547327 2849 ntBASIC14.37□□□□□ -0.11
SLC1A1P43005 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.37□□□□□ -0.11
SLC1A1P43005 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC1A1P43005 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.37□□□□□ -0.11
SLC1A1P43005 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A1P43005 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A1P43005 RN7SL774P-201ENST00000577467 290 ntBASIC14.37□□□□□ -0.11
SLC1A1P43005 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A1P43005 RN7SL219P-201ENST00000582872 296 ntBASIC14.37□□□□□ -0.11
SLC1A1P43005 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.37□□□□□ -0.11
SLC1A1P43005 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.37□□□□□ -0.11
SLC1A1P43005 AL109837.1-201ENST00000603272 613 ntBASIC14.37□□□□□ -0.11
SLC1A1P43005 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms