Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
RFC3P40938 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 RPL35P9-201ENST00000446059 350 ntBASIC12.67□□□□□ -0.38
RFC3P40938 GNG10P1-201ENST00000452289 199 ntBASIC12.67□□□□□ -0.38
RFC3P40938 RN7SL396P-201ENST00000471086 295 ntBASIC12.67□□□□□ -0.38
RFC3P40938 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.67□□□□□ -0.38
RFC3P40938 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 AL451007.2-201ENST00000632004 563 ntBASIC12.67□□□□□ -0.38
RFC3P40938 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
RFC3P40938 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
RFC3P40938 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
RFC3P40938 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
RFC3P40938 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 AC005014.1-201ENST00000432006 2976 ntBASIC12.66□□□□□ -0.38
RFC3P40938 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.66□□□□□ -0.38
RFC3P40938 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 RN7SL23P-201ENST00000484055 275 ntBASIC12.66□□□□□ -0.38
RFC3P40938 TRMT112P3-201ENST00000580149 358 ntBASIC12.66□□□□□ -0.38
RFC3P40938 MIR4472-1-201ENST00000584349 80 ntBASIC12.66□□□□□ -0.38
RFC3P40938 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 AL009176.1-201ENST00000607876 650 ntBASIC12.66□□□□□ -0.38
RFC3P40938 BAP1-211ENST00000615113 489 ntBASIC12.66□□□□□ -0.38
RFC3P40938 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 AL365181.1-201ENST00000564032 1828 ntBASIC12.66□□□□□ -0.38
RFC3P40938 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.66□□□□□ -0.38
RFC3P40938 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.66□□□□□ -0.38
RFC3P40938 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RFC3P40938 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFC3P40938 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFC3P40938 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 AC090643.2-201ENST00000623442 2029 ntBASIC12.66□□□□□ -0.38
RFC3P40938 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFC3P40938 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.65□□□□□ -0.38
RFC3P40938 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFC3P40938 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
RFC3P40938 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.65□□□□□ -0.38
RFC3P40938 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms