Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC099336.1-201ENST00000417053 1171 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 HMGN1P19-201ENST00000436976 333 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 BNIP3P13-201ENST00000599968 566 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AL022334.2-201ENST00000610000 484 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 AL157813.1-201ENST00000612996 587 ntBASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
BBS1Q8NFJ9 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AF013593.1-201ENST00000458074 1487 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 TSPY25P-201ENST00000429463 745 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 CSF2RBP1-201ENST00000447905 391 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 RPSAP36-202ENST00000494591 1261 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 KRT17P8-201ENST00000540749 863 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC022748.3-201ENST00000621828 275 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC079336.7-201ENST00000623428 1078 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC092117.1-201ENST00000621230 3250 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 NRADDP-202ENST00000641269 1585 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 IL9RP3-201ENST00000442856 1674 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC040160.2-201ENST00000623816 1675 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 AC073957.3-201ENST00000609998 6758 ntBASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
BBS1Q8NFJ9 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BBS1Q8NFJ9 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms