Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC007881.3-201ENST00000608897 607 ntBASIC14.99□□□□□ -0.01
CASP4P49662 AC103691.2-201ENST00000618824 433 ntBASIC14.99□□□□□ -0.01
CASP4P49662 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.99□□□□□ -0.01
CASP4P49662 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.99□□□□□ -0.01
CASP4P49662 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.99□□□□□ -0.01
CASP4P49662 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CASP4P49662 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.99□□□□□ -0.01
CASP4P49662 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CASP4P49662 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 AC083964.2-201ENST00000623988 2396 ntBASIC14.98□□□□□ -0.01
CASP4P49662 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 DKKL1P1-201ENST00000400550 698 ntBASIC14.98□□□□□ -0.01
CASP4P49662 OR2W2P-201ENST00000406313 909 ntBASIC14.98□□□□□ -0.01
CASP4P49662 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 CHCHD2P9-201ENST00000461726 456 ntBASIC14.98□□□□□ -0.01
CASP4P49662 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.98□□□□□ -0.01
CASP4P49662 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.98□□□□□ -0.01
CASP4P49662 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 AL009176.1-201ENST00000607876 650 ntBASIC14.98□□□□□ -0.01
CASP4P49662 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.98□□□□□ -0.01
CASP4P49662 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.98□□□□□ -0.01
CASP4P49662 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CASP4P49662 AC102953.2-201ENST00000609755 3026 ntBASIC14.98□□□□□ -0.01
CASP4P49662 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CASP4P49662 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP4P49662 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP4P49662 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
CASP4P49662 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP4P49662 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 RN7SKP109-201ENST00000410592 316 ntBASIC14.97□□□□□ -0.01
CASP4P49662 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.97□□□□□ -0.01
CASP4P49662 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CASP4P49662 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 RN7SKP155-201ENST00000516031 288 ntBASIC14.97□□□□□ -0.01
CASP4P49662 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.97□□□□□ -0.01
CASP4P49662 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.97□□□□□ -0.01
CASP4P49662 AC025262.2-201ENST00000623975 1056 ntBASIC14.97□□□□□ -0.01
CASP4P49662 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms