Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SLC6A9P48067 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC6A9P48067 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SLC6A9P48067 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SLC6A9P48067 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 AC008620.2-201ENST00000510294 1569 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 RN7SKP214-201ENST00000364208 315 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.28□□□□□ -0.44
SLC6A9P48067 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 AC006987.1-201ENST00000413610 527 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 BCYRN1-201ENST00000418539 200 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 RPS9P1-201ENST00000419943 583 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.28□□□□□ -0.44
SLC6A9P48067 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 NKAIN1P1-201ENST00000435754 582 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.28□□□□□ -0.44
SLC6A9P48067 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.28□□□□□ -0.44
SLC6A9P48067 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 AC138649.2-201ENST00000615886 705 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.28□□□□□ -0.44
SLC6A9P48067 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 FMO6P-201ENST00000236166 1620 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 SALL4P6-201ENST00000429385 1691 ntBASIC12.28□□□□□ -0.44
SLC6A9P48067 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SLC6A9P48067 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC6A9P48067 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC6A9P48067 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.27□□□□□ -0.44
SLC6A9P48067 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC6A9P48067 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SLC6A9P48067 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC6A9P48067 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
SLC6A9P48067 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.44
SLC6A9P48067 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 AP002761.4-201ENST00000565433 3361 ntBASIC12.27□□□□□ -0.45
SLC6A9P48067 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.27□□□□□ -0.45
SLC6A9P48067 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.27□□□□□ -0.45
SLC6A9P48067 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.27□□□□□ -0.45
SLC6A9P48067 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 DUX4L50-201ENST00000455245 715 ntBASIC12.27□□□□□ -0.45
SLC6A9P48067 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 AC090857.1-201ENST00000527400 390 ntBASIC12.27□□□□□ -0.45
SLC6A9P48067 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.27□□□□□ -0.45
SLC6A9P48067 AC004623.1-201ENST00000624592 2127 ntBASIC12.27□□□□□ -0.45
SLC6A9P48067 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC6A9P48067 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms