Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 CCL25-202ENST00000315626 450 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 RPL18AP15-201ENST00000430258 517 ntBASIC18.05■□□□□ 0.48
USP6P35125 AC010997.1-201ENST00000447646 350 ntBASIC18.05■□□□□ 0.48
USP6P35125 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC18.05■□□□□ 0.48
USP6P35125 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC18.05■□□□□ 0.48
USP6P35125 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 AC142086.5-202ENST00000562500 217 ntBASIC18.05■□□□□ 0.48
USP6P35125 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 ACTBP9-201ENST00000587663 1099 ntBASIC18.05■□□□□ 0.48
USP6P35125 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
USP6P35125 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC18.05■□□□□ 0.48
USP6P35125 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
USP6P35125 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
USP6P35125 AC005840.4-201ENST00000541242 2494 ntBASIC18.05■□□□□ 0.48
USP6P35125 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 CLUHP8-201ENST00000547527 1485 ntBASIC18.04■□□□□ 0.48
USP6P35125 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
USP6P35125 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC18.04■□□□□ 0.48
USP6P35125 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 AC068587.6-202ENST00000641839 5619 ntBASIC18.04■□□□□ 0.48
USP6P35125 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
USP6P35125 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
USP6P35125 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 FAM86JP-202ENST00000484500 988 ntBASIC18.04■□□□□ 0.48
USP6P35125 AADAC-202ENST00000488869 719 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 RN7SL2-201ENST00000490232 300 ntBASIC18.04■□□□□ 0.48
USP6P35125 RN7SL4P-201ENST00000584058 295 ntBASIC18.04■□□□□ 0.48
USP6P35125 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC18.04■□□□□ 0.48
USP6P35125 AC099795.2-201ENST00000639582 440 ntBASIC18.04■□□□□ 0.48
USP6P35125 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC18.04■□□□□ 0.48
USP6P35125 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
USP6P35125 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 CYP2B7P-201ENST00000541697 1476 ntBASIC18.04■□□□□ 0.48
USP6P35125 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
USP6P35125 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
USP6P35125 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
USP6P35125 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.03■□□□□ 0.48
USP6P35125 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC18.03■□□□□ 0.48
USP6P35125 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC18.03■□□□□ 0.48
USP6P35125 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 MYL6-215ENST00000549566 685 ntTSL 2 BASIC18.03■□□□□ 0.48
USP6P35125 GOLGA2P10-201ENST00000550961 817 ntBASIC18.03■□□□□ 0.48
USP6P35125 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms