Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHRNA3P32297 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CHRNA3P32297 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNA3P32297 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNA3P32297 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRNA3P32297 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRNA3P32297 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRNA3P32297 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.56□□□□□ -0.08
CHRNA3P32297 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CHRNA3P32297 AC016629.1-201ENST00000596579 586 ntBASIC14.56□□□□□ -0.08
CHRNA3P32297 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
CHRNA3P32297 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 TBC1D3J-201ENST00000620719 1426 ntBASIC14.56□□□□□ -0.08
CHRNA3P32297 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CHRNA3P32297 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CHRNA3P32297 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC14.56□□□□□ -0.08
CHRNA3P32297 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRNA3P32297 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CHRNA3P32297 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.55□□□□□ -0.08
CHRNA3P32297 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRNA3P32297 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRNA3P32297 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.55□□□□□ -0.08
CHRNA3P32297 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 DUX4L50-201ENST00000455245 715 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 IGLV3-15-201ENST00000518356 244 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.55□□□□□ -0.08
CHRNA3P32297 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CHRNA3P32297 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 AL356740.1-201ENST00000602192 1297 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 AL022334.2-201ENST00000610000 484 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CHRNA3P32297 AL139424.3-202ENST00000641619 917 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.55□□□□□ -0.08
CHRNA3P32297 FAM90A2P-201ENST00000511144 1395 ntBASIC14.55□□□□□ -0.08
CHRNA3P32297 FAM90A25P-201ENST00000528404 1395 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms