Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 AC239868.1-201ENST00000369385 493 ntBASIC11.98□□□□□ -0.49
EPHA1P21709 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.98□□□□□ -0.49
EPHA1P21709 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
EPHA1P21709 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC11.98□□□□□ -0.49
EPHA1P21709 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 MIR3147-201ENST00000577811 66 ntBASIC11.98□□□□□ -0.49
EPHA1P21709 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.98□□□□□ -0.49
EPHA1P21709 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.98□□□□□ -0.49
EPHA1P21709 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
EPHA1P21709 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC11.98□□□□□ -0.49
EPHA1P21709 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 AC027601.3-201ENST00000622907 509 ntBASIC11.98□□□□□ -0.49
EPHA1P21709 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
EPHA1P21709 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.98□□□□□ -0.49
EPHA1P21709 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.98□□□□□ -0.49
EPHA1P21709 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
EPHA1P21709 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 KRT8P21-201ENST00000430398 1491 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 FAM90A7P-201ENST00000382628 1395 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 FAM90A23P-201ENST00000400136 1395 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 AC026316.1-201ENST00000398900 414 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.97□□□□□ -0.49
EPHA1P21709 PFN2-206ENST00000461930 606 ntTSL 4 BASIC11.97□□□□□ -0.49
EPHA1P21709 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
EPHA1P21709 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC11.97□□□□□ -0.49
EPHA1P21709 AC103691.2-201ENST00000618824 433 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 Z98259.2-201ENST00000641583 609 ntBASIC11.97□□□□□ -0.49
EPHA1P21709 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.97□□□□□ -0.49
EPHA1P21709 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
EPHA1P21709 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms