Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.77□□□□□ -0.37
BMP4P12644 NDUFV2P1-201ENST00000596415 907 ntBASIC12.77□□□□□ -0.37
BMP4P12644 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BMP4P12644 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 AC002472.3-201ENST00000640124 621 ntBASIC12.77□□□□□ -0.37
BMP4P12644 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 MRPL37P1-201ENST00000592451 1337 ntBASIC12.77□□□□□ -0.37
BMP4P12644 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
BMP4P12644 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BMP4P12644 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.77□□□□□ -0.37
BMP4P12644 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
BMP4P12644 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 AL359510.2-201ENST00000624958 2249 ntBASIC12.76□□□□□ -0.37
BMP4P12644 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 AL662890.1-201ENST00000396818 632 ntBASIC12.76□□□□□ -0.37
BMP4P12644 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.76□□□□□ -0.37
BMP4P12644 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.76□□□□□ -0.37
BMP4P12644 FNTAP2-201ENST00000430308 634 ntBASIC12.76□□□□□ -0.37
BMP4P12644 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 AC011742.3-201ENST00000439053 820 ntBASIC12.76□□□□□ -0.37
BMP4P12644 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.76□□□□□ -0.37
BMP4P12644 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.76□□□□□ -0.37
BMP4P12644 HIST2H2BB-201ENST00000449108 381 ntBASIC12.76□□□□□ -0.37
BMP4P12644 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 AC100827.2-201ENST00000563214 1194 ntBASIC12.76□□□□□ -0.37
BMP4P12644 RN7SL163P-201ENST00000583100 276 ntBASIC12.76□□□□□ -0.37
BMP4P12644 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.76□□□□□ -0.37
BMP4P12644 AC100757.4-201ENST00000626934 759 ntBASIC12.76□□□□□ -0.37
BMP4P12644 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
BMP4P12644 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.76□□□□□ -0.37
BMP4P12644 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 SALL4P5-201ENST00000419001 1760 ntBASIC12.76□□□□□ -0.37
BMP4P12644 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
BMP4P12644 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.76□□□□□ -0.37
BMP4P12644 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
BMP4P12644 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
BMP4P12644 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.75□□□□□ -0.37
BMP4P12644 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms