Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.98□□□□□ -0.01
VTNP04004 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.98□□□□□ -0.01
VTNP04004 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.98□□□□□ -0.01
VTNP04004 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VTNP04004 EGLN3-205ENST00000547327 2849 ntBASIC14.98□□□□□ -0.01
VTNP04004 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VTNP04004 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.97□□□□□ -0.01
VTNP04004 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.97□□□□□ -0.01
VTNP04004 METTL7AP1-201ENST00000547343 496 ntBASIC14.97□□□□□ -0.01
VTNP04004 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC14.97□□□□□ -0.01
VTNP04004 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.97□□□□□ -0.01
VTNP04004 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.97□□□□□ -0.01
VTNP04004 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VTNP04004 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.97□□□□□ -0.01
VTNP04004 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.97□□□□□ -0.01
VTNP04004 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
VTNP04004 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.96□□□□□ -0.01
VTNP04004 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 AC025594.1-201ENST00000469533 543 ntBASIC14.96□□□□□ -0.01
VTNP04004 AC083801.1-201ENST00000491689 358 ntBASIC14.96□□□□□ -0.01
VTNP04004 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VTNP04004 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.96□□□□□ -0.01
VTNP04004 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.96□□□□□ -0.01
VTNP04004 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.96□□□□□ -0.01
VTNP04004 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.96□□□□□ -0.01
VTNP04004 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.96□□□□□ -0.01
VTNP04004 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VTNP04004 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms