Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SNCAIPQ9Y6H5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC26.25■■□□□ 1.79
SNCAIPQ9Y6H5 KRT18P61-201ENST00000585825 1298 ntBASIC26.25■■□□□ 1.79
SNCAIPQ9Y6H5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNCAIPQ9Y6H5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SNCAIPQ9Y6H5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 DUX4L4-201ENST00000566884 1269 ntBASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
SNCAIPQ9Y6H5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 AP005435.1-201ENST00000529293 1178 ntBASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.23■■□□□ 1.79
SNCAIPQ9Y6H5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.22■■□□□ 1.79
SNCAIPQ9Y6H5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 FP325331.1-202ENST00000623531 1380 ntBASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 AC135731.1-201ENST00000569415 2548 ntBASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.21■■□□□ 1.79
SNCAIPQ9Y6H5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SNCAIPQ9Y6H5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SNCAIPQ9Y6H5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.2■■□□□ 1.78
SNCAIPQ9Y6H5 HLA-L-209ENST00000420110 1011 ntBASIC26.2■■□□□ 1.78
SNCAIPQ9Y6H5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.2■■□□□ 1.78
SNCAIPQ9Y6H5 AC105233.4-201ENST00000642045 216 ntBASIC26.2■■□□□ 1.78
SNCAIPQ9Y6H5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNCAIPQ9Y6H5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNCAIPQ9Y6H5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SNCAIPQ9Y6H5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNCAIPQ9Y6H5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 AC006015.1-201ENST00000429970 570 ntBASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SNCAIPQ9Y6H5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNCAIPQ9Y6H5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms