Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGB3Q9Y5G1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGB3Q9Y5G1 C1orf229-201ENST00000623686 2258 ntBASIC21.08■□□□□ 0.96
PCDHGB3Q9Y5G1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PCDHGB3Q9Y5G1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGB3Q9Y5G1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGB3Q9Y5G1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGB3Q9Y5G1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 MIR6722-201ENST00000617286 78 ntBASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGB3Q9Y5G1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 LINC00565-201ENST00000562710 2331 ntBASIC21.03■□□□□ 0.96
PCDHGB3Q9Y5G1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 TSPY9P-201ENST00000440215 945 ntBASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 TSPY11P-201ENST00000442607 1045 ntBASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHGB3Q9Y5G1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHGB3Q9Y5G1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHGB3Q9Y5G1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms