Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 LINC01529-204ENST00000636474 1715 ntBASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 AC142381.3-201ENST00000568208 1670 ntBASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 AC138932.3-201ENST00000567634 1902 ntBASIC24.2■■□□□ 1.46
PCDHB7Q9Y5E2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 AL137784.2-201ENST00000607332 1000 ntBASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 AC144652.1-201ENST00000609974 1624 ntBASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHB7Q9Y5E2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHB7Q9Y5E2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 RARRES2P11-201ENST00000635158 484 ntBASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
PCDHB7Q9Y5E2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 AP005435.1-201ENST00000529293 1178 ntBASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHB7Q9Y5E2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 AC090192.1-201ENST00000517740 490 ntBASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 CCDC92B-201ENST00000575506 885 ntBASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB7Q9Y5E2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB7Q9Y5E2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.14■■□□□ 1.45
PCDHB7Q9Y5E2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDHB7Q9Y5E2 LINC02228-203ENST00000641970 1355 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms