Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 AC090192.1-201ENST00000517740 490 ntBASIC30.75■■■□□ 2.51
NINLQ9Y2I6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
NINLQ9Y2I6 IRS3P-201ENST00000223076 1006 ntBASIC30.74■■■□□ 2.51
NINLQ9Y2I6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 IGHV3-19-201ENST00000521488 291 ntBASIC30.74■■■□□ 2.51
NINLQ9Y2I6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
NINLQ9Y2I6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NINLQ9Y2I6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
NINLQ9Y2I6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NINLQ9Y2I6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
NINLQ9Y2I6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
NINLQ9Y2I6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
NINLQ9Y2I6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NINLQ9Y2I6 AC097381.1-201ENST00000429019 1296 ntBASIC30.72■■■□□ 2.51
NINLQ9Y2I6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.72■■■□□ 2.51
NINLQ9Y2I6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
NINLQ9Y2I6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
NINLQ9Y2I6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 AC079630.1-202ENST00000618127 1840 ntBASIC30.71■■■□□ 2.51
NINLQ9Y2I6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
NINLQ9Y2I6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NINLQ9Y2I6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
NINLQ9Y2I6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.7■■■□□ 2.51
NINLQ9Y2I6 AC126544.1-201ENST00000580842 1059 ntBASIC30.7■■■□□ 2.51
NINLQ9Y2I6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NINLQ9Y2I6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
NINLQ9Y2I6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NINLQ9Y2I6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
NINLQ9Y2I6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
NINLQ9Y2I6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
NINLQ9Y2I6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC30.69■■■□□ 2.5
NINLQ9Y2I6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC30.69■■■□□ 2.5
NINLQ9Y2I6 RARRES2P11-201ENST00000635158 484 ntBASIC30.69■■■□□ 2.5
NINLQ9Y2I6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.68■■■□□ 2.5
NINLQ9Y2I6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
NINLQ9Y2I6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 TSPY26P-201ENST00000476365 1326 ntBASIC30.66■■■□□ 2.5
NINLQ9Y2I6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC30.66■■■□□ 2.5
NINLQ9Y2I6 AC010525.1-201ENST00000585559 441 ntBASIC30.66■■■□□ 2.5
NINLQ9Y2I6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NINLQ9Y2I6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
NINLQ9Y2I6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.49
NINLQ9Y2I6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.49
NINLQ9Y2I6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms