Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 AL353803.4-201ENST00000565882 1934 ntBASIC20.68■□□□□ 0.9
POLE3Q9NRF9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.68■□□□□ 0.9
POLE3Q9NRF9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
POLE3Q9NRF9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 TSPY9P-201ENST00000440215 945 ntBASIC20.66■□□□□ 0.9
POLE3Q9NRF9 TSPY11P-201ENST00000442607 1045 ntBASIC20.66■□□□□ 0.9
POLE3Q9NRF9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
POLE3Q9NRF9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
POLE3Q9NRF9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
POLE3Q9NRF9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.64■□□□□ 0.9
POLE3Q9NRF9 LINC01529-204ENST00000636474 1715 ntBASIC20.64■□□□□ 0.9
POLE3Q9NRF9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLE3Q9NRF9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
POLE3Q9NRF9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.64■□□□□ 0.89
POLE3Q9NRF9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
POLE3Q9NRF9 AC133561.1-201ENST00000568600 2415 ntBASIC20.64■□□□□ 0.89
POLE3Q9NRF9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
POLE3Q9NRF9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 MIR6724-1-201ENST00000616420 92 ntBASIC20.63■□□□□ 0.89
POLE3Q9NRF9 MIR6724-2-201ENST00000616483 92 ntBASIC20.63■□□□□ 0.89
POLE3Q9NRF9 MIR6724-4-201ENST00000617390 92 ntBASIC20.63■□□□□ 0.89
POLE3Q9NRF9 MIR6724-3-201ENST00000622482 92 ntBASIC20.63■□□□□ 0.89
POLE3Q9NRF9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
POLE3Q9NRF9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 C9orf163-202ENST00000624034 2573 ntBASIC20.62■□□□□ 0.89
POLE3Q9NRF9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.62■□□□□ 0.89
POLE3Q9NRF9 AL035685.1-201ENST00000636663 812 ntBASIC20.62■□□□□ 0.89
POLE3Q9NRF9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
POLE3Q9NRF9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 UNC93B8-201ENST00000511903 705 ntBASIC20.61■□□□□ 0.89
POLE3Q9NRF9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
POLE3Q9NRF9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms