Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.2■■□□□ 1.62
PDLIM7Q9NR12 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 AL358852.1-201ENST00000623174 1268 ntBASIC25.19■■□□□ 1.62
PDLIM7Q9NR12 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDLIM7Q9NR12 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDLIM7Q9NR12 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 MIR6084-201ENST00000622012 110 ntBASIC25.16■■□□□ 1.62
PDLIM7Q9NR12 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 CCDC92B-201ENST00000575506 885 ntBASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PDLIM7Q9NR12 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 HLA-L-209ENST00000420110 1011 ntBASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PDLIM7Q9NR12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
PDLIM7Q9NR12 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PDLIM7Q9NR12 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 pRNA.6-201ENST00000610482 90 ntBASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 pRNA.5-201ENST00000612139 90 ntBASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 pRNA.11-201ENST00000618423 90 ntBASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 pRNA.13-201ENST00000619112 90 ntBASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDLIM7Q9NR12 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 AC012414.1-201ENST00000556676 535 ntBASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 NTF6G-201ENST00000591094 616 ntBASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PDLIM7Q9NR12 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PDLIM7Q9NR12 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDLIM7Q9NR12 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDLIM7Q9NR12 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.1■■□□□ 1.61
PDLIM7Q9NR12 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms