Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 ALDH1A3-203ENST00000557963 1670 ntBASIC21.6■■□□□ 1.05
CLK4Q9HAZ1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLK4Q9HAZ1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.58■■□□□ 1.05
CLK4Q9HAZ1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLK4Q9HAZ1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLK4Q9HAZ1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLK4Q9HAZ1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLK4Q9HAZ1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.57■■□□□ 1.04
CLK4Q9HAZ1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.56■■□□□ 1.04
CLK4Q9HAZ1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 AL356740.2-201ENST00000601559 647 ntBASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.55■■□□□ 1.04
CLK4Q9HAZ1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 MIR3621-201ENST00000580529 85 ntBASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLK4Q9HAZ1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 AC137767.1-201ENST00000602918 1920 ntBASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CLK4Q9HAZ1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.52■■□□□ 1.04
CLK4Q9HAZ1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLK4Q9HAZ1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLK4Q9HAZ1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLK4Q9HAZ1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLK4Q9HAZ1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms