Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 C1orf229-201ENST00000623686 2258 ntBASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LRRC40Q9H9A6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 AC079834.2-201ENST00000609776 1949 ntBASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRC40Q9H9A6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC40Q9H9A6 AC233723.2-201ENST00000623798 2106 ntBASIC22.64■■□□□ 1.22
LRRC40Q9H9A6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC40Q9H9A6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
LRRC40Q9H9A6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 AL035685.1-201ENST00000636663 812 ntBASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
LRRC40Q9H9A6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 FP325331.1-202ENST00000623531 1380 ntBASIC22.63■■□□□ 1.21
LRRC40Q9H9A6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 UNC93B8-201ENST00000511903 705 ntBASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 AL117328.2-201ENST00000624617 1940 ntBASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 LINC01529-204ENST00000636474 1715 ntBASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRC40Q9H9A6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
LRRC40Q9H9A6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 AC009102.2-201ENST00000606772 1639 ntBASIC22.6■■□□□ 1.21
LRRC40Q9H9A6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 MIR6724-1-201ENST00000616420 92 ntBASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 MIR6724-2-201ENST00000616483 92 ntBASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 MIR6724-4-201ENST00000617390 92 ntBASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 MIR6724-3-201ENST00000622482 92 ntBASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LRRC40Q9H9A6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRC40Q9H9A6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC40Q9H9A6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.58■■□□□ 1.21
LRRC40Q9H9A6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.58■■□□□ 1.21
LRRC40Q9H9A6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRC40Q9H9A6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LRRC40Q9H9A6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.2
LRRC40Q9H9A6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRC40Q9H9A6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LRRC40Q9H9A6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
LRRC40Q9H9A6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRC40Q9H9A6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRC40Q9H9A6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRC40Q9H9A6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LRRC40Q9H9A6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.56■■□□□ 1.2
LRRC40Q9H9A6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms