Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NELFAQ9H3P2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NELFAQ9H3P2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NELFAQ9H3P2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.83■□□□□ 0.77
NELFAQ9H3P2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.83■□□□□ 0.77
NELFAQ9H3P2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.83■□□□□ 0.77
NELFAQ9H3P2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NELFAQ9H3P2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NELFAQ9H3P2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NELFAQ9H3P2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NELFAQ9H3P2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NELFAQ9H3P2 DUSP8P3-201ENST00000399571 1760 ntBASIC19.83■□□□□ 0.76
NELFAQ9H3P2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 AC079630.1-202ENST00000618127 1840 ntBASIC19.82■□□□□ 0.76
NELFAQ9H3P2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NELFAQ9H3P2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 AC009102.2-201ENST00000606772 1639 ntBASIC19.81■□□□□ 0.76
NELFAQ9H3P2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 MIR4466-201ENST00000606121 54 ntBASIC19.81■□□□□ 0.76
NELFAQ9H3P2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NELFAQ9H3P2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NELFAQ9H3P2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
NELFAQ9H3P2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NELFAQ9H3P2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NELFAQ9H3P2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NELFAQ9H3P2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms