Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS11Q9H270 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS11Q9H270 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS11Q9H270 AF131216.4-201ENST00000638924 1588 ntBASIC22.39■■□□□ 1.18
VPS11Q9H270 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS11Q9H270 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS11Q9H270 THA1P-201ENST00000590384 1145 ntBASIC22.39■■□□□ 1.17
VPS11Q9H270 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS11Q9H270 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
VPS11Q9H270 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
VPS11Q9H270 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 ATP5G2P3-201ENST00000429083 425 ntBASIC22.38■■□□□ 1.17
VPS11Q9H270 MIR4281-201ENST00000580852 62 ntBASIC22.38■■□□□ 1.17
VPS11Q9H270 PVT1_1.1-201ENST00000615125 194 ntBASIC22.38■■□□□ 1.17
VPS11Q9H270 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS11Q9H270 AC079630.1-202ENST00000618127 1840 ntBASIC22.38■■□□□ 1.17
VPS11Q9H270 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS11Q9H270 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS11Q9H270 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.37■■□□□ 1.17
VPS11Q9H270 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.37■■□□□ 1.17
VPS11Q9H270 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS11Q9H270 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS11Q9H270 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
VPS11Q9H270 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 KRT18P24-201ENST00000344739 1156 ntBASIC22.36■■□□□ 1.17
VPS11Q9H270 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS11Q9H270 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.36■■□□□ 1.17
VPS11Q9H270 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 AC010980.1-201ENST00000587192 1142 ntBASIC22.36■■□□□ 1.17
VPS11Q9H270 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
VPS11Q9H270 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS11Q9H270 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.36■■□□□ 1.17
VPS11Q9H270 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS11Q9H270 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.35■■□□□ 1.17
VPS11Q9H270 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS11Q9H270 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS11Q9H270 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS11Q9H270 AC074183.2-201ENST00000623112 922 ntBASIC22.35■■□□□ 1.17
VPS11Q9H270 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.35■■□□□ 1.17
VPS11Q9H270 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS11Q9H270 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
VPS11Q9H270 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
VPS11Q9H270 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS11Q9H270 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS11Q9H270 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS11Q9H270 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
VPS11Q9H270 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS11Q9H270 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS11Q9H270 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.33■■□□□ 1.17
VPS11Q9H270 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
VPS11Q9H270 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.33■■□□□ 1.17
VPS11Q9H270 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS11Q9H270 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS11Q9H270 PKD1P6-201ENST00000343738 4769 ntBASIC22.33■■□□□ 1.17
VPS11Q9H270 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.33■■□□□ 1.17
VPS11Q9H270 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
VPS11Q9H270 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS11Q9H270 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
VPS11Q9H270 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS11Q9H270 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.33■■□□□ 1.17
VPS11Q9H270 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms