Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RPAP1Q9BWH6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RPAP1Q9BWH6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RPAP1Q9BWH6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 AC012676.1-201ENST00000574705 1949 ntBASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 AC092666.2-201ENST00000613287 246 ntBASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RPAP1Q9BWH6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RPAP1Q9BWH6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 AC136469.2-201ENST00000623944 1028 ntBASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 AC241377.3-202ENST00000626088 1088 ntBASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 AC241585.3-202ENST00000628937 1088 ntBASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 AC245100.8-202ENST00000629247 1058 ntBASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
RPAP1Q9BWH6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 AC097381.1-201ENST00000429019 1296 ntBASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RPAP1Q9BWH6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 DUSP8P5-201ENST00000422884 1815 ntBASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RPAP1Q9BWH6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.14■■□□□ 1.94
RPAP1Q9BWH6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
RPAP1Q9BWH6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC27.14■■□□□ 1.94
RPAP1Q9BWH6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.14■■□□□ 1.94
RPAP1Q9BWH6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
RPAP1Q9BWH6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
RPAP1Q9BWH6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.13■■□□□ 1.93
RPAP1Q9BWH6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RPAP1Q9BWH6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.11■■□□□ 1.93
RPAP1Q9BWH6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC27.1■■□□□ 1.93
RPAP1Q9BWH6 AC099791.1-201ENST00000416440 715 ntBASIC27.09■■□□□ 1.93
RPAP1Q9BWH6 AC006455.2-201ENST00000429931 906 ntBASIC27.09■■□□□ 1.93
RPAP1Q9BWH6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC27.09■■□□□ 1.93
RPAP1Q9BWH6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms