Protein–RNA interactions for Protein: Q99717

SMAD5, Mothers against decapentaplegic homolog 5, humanhuman

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5Q99717 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD5Q99717 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD5Q99717 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.98■□□□□ 0.95
SMAD5Q99717 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.98■□□□□ 0.95
SMAD5Q99717 AC136469.2-201ENST00000623944 1028 ntBASIC20.98■□□□□ 0.95
SMAD5Q99717 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SMAD5Q99717 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SMAD5Q99717 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.97■□□□□ 0.95
SMAD5Q99717 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD5Q99717 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 IRS3P-201ENST00000223076 1006 ntBASIC20.97■□□□□ 0.95
SMAD5Q99717 AC099791.1-201ENST00000416440 715 ntBASIC20.97■□□□□ 0.95
SMAD5Q99717 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD5Q99717 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.97■□□□□ 0.95
SMAD5Q99717 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD5Q99717 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD5Q99717 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
SMAD5Q99717 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SMAD5Q99717 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD5Q99717 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD5Q99717 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SMAD5Q99717 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SMAD5Q99717 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.96■□□□□ 0.95
SMAD5Q99717 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.95■□□□□ 0.94
SMAD5Q99717 AC087623.3-201ENST00000607047 1098 ntBASIC20.95■□□□□ 0.94
SMAD5Q99717 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.95■□□□□ 0.94
SMAD5Q99717 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.95■□□□□ 0.94
SMAD5Q99717 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.95■□□□□ 0.94
SMAD5Q99717 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD5Q99717 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SMAD5Q99717 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.94■□□□□ 0.94
SMAD5Q99717 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SMAD5Q99717 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD5Q99717 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
SMAD5Q99717 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.93■□□□□ 0.94
SMAD5Q99717 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SMAD5Q99717 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD5Q99717 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.93■□□□□ 0.94
SMAD5Q99717 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SMAD5Q99717 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD5Q99717 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD5Q99717 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD5Q99717 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SMAD5Q99717 AC233992.3-201ENST00000607491 485 ntBASIC20.92■□□□□ 0.94
SMAD5Q99717 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.92■□□□□ 0.94
SMAD5Q99717 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SMAD5Q99717 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 AL161729.1-201ENST00000604104 1402 ntBASIC20.92■□□□□ 0.94
SMAD5Q99717 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD5Q99717 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD5Q99717 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD5Q99717 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD5Q99717 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
SMAD5Q99717 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD5Q99717 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMAD5Q99717 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD5Q99717 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMAD5Q99717 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMAD5Q99717 BX842568.3-201ENST00000418104 571 ntBASIC20.91■□□□□ 0.94
SMAD5Q99717 AC006455.2-201ENST00000429931 906 ntBASIC20.91■□□□□ 0.94
SMAD5Q99717 AL162430.1-201ENST00000480705 870 ntBASIC20.91■□□□□ 0.94
SMAD5Q99717 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms