Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 LINC00565-201ENST00000562710 2331 ntBASIC17.65■□□□□ 0.42
RNF2Q99496 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF2Q99496 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RNF2Q99496 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF2Q99496 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF2Q99496 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF2Q99496 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF2Q99496 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF2Q99496 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 AC120024.1-201ENST00000562672 995 ntBASIC17.64■□□□□ 0.41
RNF2Q99496 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF2Q99496 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF2Q99496 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RNF2Q99496 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF2Q99496 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF2Q99496 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RNF2Q99496 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF2Q99496 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RNF2Q99496 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF2Q99496 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 THA1P-201ENST00000590384 1145 ntBASIC17.63■□□□□ 0.41
RNF2Q99496 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF2Q99496 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF2Q99496 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF2Q99496 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
RNF2Q99496 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RNF2Q99496 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF2Q99496 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RNF2Q99496 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF2Q99496 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF2Q99496 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF2Q99496 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF2Q99496 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF2Q99496 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF2Q99496 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RNF2Q99496 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 KRT18P24-201ENST00000344739 1156 ntBASIC17.61■□□□□ 0.41
RNF2Q99496 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF2Q99496 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF2Q99496 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF2Q99496 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF2Q99496 SLC25A24-204ENST00000569674 2357 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms