Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PRICKLE1Q96MT3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 AC144652.1-201ENST00000609974 1624 ntBASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 AL138724.1-201ENST00000606771 1088 ntBASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 AC011298.3-201ENST00000615796 283 ntBASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.08■■□□□ 1.29
PRICKLE1Q96MT3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRICKLE1Q96MT3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PRICKLE1Q96MT3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 pRNA.6-201ENST00000610482 90 ntBASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 pRNA.5-201ENST00000612139 90 ntBASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 pRNA.11-201ENST00000618423 90 ntBASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 pRNA.13-201ENST00000619112 90 ntBASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PRICKLE1Q96MT3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 AC079630.1-202ENST00000618127 1840 ntBASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.06■■□□□ 1.28
PRICKLE1Q96MT3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 EDA-201ENST00000338901 1233 ntBASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 AC136469.2-201ENST00000623944 1028 ntBASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.05■■□□□ 1.28
PRICKLE1Q96MT3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 SUDS3P1-201ENST00000505831 966 ntBASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 AP001330.3-201ENST00000520123 633 ntBASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PRICKLE1Q96MT3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 DUX4L4-201ENST00000566884 1269 ntBASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PRICKLE1Q96MT3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 FP325331.1-202ENST00000623531 1380 ntBASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 AL355001.2-201ENST00000620617 1191 ntBASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.02■■□□□ 1.28
PRICKLE1Q96MT3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 AF213884.3-201ENST00000563833 479 ntBASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 AC142381.2-201ENST00000566120 298 ntBASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.01■■□□□ 1.27
PRICKLE1Q96MT3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms